Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL19P11-201ENST00000495944 589 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC005178.1-201ENST00000508392 440 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RNU6-1178P-201ENST00000516674 107 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC005771.1-201ENST00000585581 349 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC245052.7-201ENST00000601161 359 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 BMS1P7-201ENST00000602440 1052 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC012175.1-201ENST00000603755 531 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LARP7P1-201ENST00000605576 316 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC015819.1-201ENST00000613588 663 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 U1.41-201ENST00000617626 165 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MIR6823-201ENST00000622118 61 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC007603.3-201ENST00000636915 979 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL731532.1-201ENST00000623972 4236 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL157831.2-201ENST00000564681 3095 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.77□□□□□ -1.48
SEC61A2Q9H9S3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 U3.4-201ENST00000363352 213 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 Y_RNA.192-201ENST00000363977 102 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 RNU6-31P-201ENST00000384388 108 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 RPL10P10-201ENST00000403509 664 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AL359092.1-201ENST00000417156 265 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC097721.1-201ENST00000427150 1253 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 Z74696.2-201ENST00000436514 498 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AL606662.1-201ENST00000445763 553 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 RPL35AP19-201ENST00000469425 329 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 RPL9P33-201ENST00000484311 566 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC092349.1-201ENST00000504903 310 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 PGBD4P4-201ENST00000509673 613 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 OR5H7P-201ENST00000514084 930 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AC084337.1-201ENST00000524809 686 ntBASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.77□□□□□ -1.49
SEC61A2Q9H9S3 AP000873.5-201ENST00000533906 236 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms