Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TOPBP1Q92547 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TOPBP1Q92547 ECM1P2-201ENST00000503354 1577 ntBASIC8.34□□□□□ -1.07
TOPBP1Q92547 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.34□□□□□ -1.07
TOPBP1Q92547 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TOPBP1Q92547 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TOPBP1Q92547 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 ATG4AP1-201ENST00000416893 538 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AL645608.4-201ENST00000423619 154 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC017019.1-201ENST00000426129 261 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 RPL12P28-201ENST00000430852 489 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC044797.1-201ENST00000445744 679 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 RPS5P7-201ENST00000456664 608 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 RPL7AP52-201ENST00000458096 790 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 IMPA1P1-201ENST00000510718 842 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC079064.1-201ENST00000528365 362 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
TOPBP1Q92547 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
TOPBP1Q92547 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
TOPBP1Q92547 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC115286.1-201ENST00000604298 434 ntBASIC8.34□□□□□ -1.08
TOPBP1Q92547 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.08
TOPBP1Q92547 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.08
TOPBP1Q92547 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 AC007998.4-201ENST00000612496 2533 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 MAPK10-270ENST00000641102 3538 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 RNA5SP345-201ENST00000410646 108 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 GAS5-208ENST00000425771 242 ntTSL 3 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 PSAT1P4-201ENST00000466500 526 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 RN7SL441P-201ENST00000492388 296 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TOPBP1Q92547 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 CCDC58P3-201ENST00000590792 430 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC8.33□□□□□ -1.08
TOPBP1Q92547 AC087821.1-201ENST00000623639 567 ntBASIC8.33□□□□□ -1.08
TOPBP1Q92547 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC097063.1-201ENST00000426714 1797 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 SNORA70.10-201ENST00000384515 134 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 RPL21P108-201ENST00000413857 481 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 AL389915.1-201ENST00000422463 466 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC108751.3-201ENST00000461814 1020 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AP000619.2-201ENST00000546014 969 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 MIR3939-201ENST00000582614 106 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 BNIP3P33-201ENST00000598912 569 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC073091.2-201ENST00000603205 907 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 KYNUP3-201ENST00000574386 1341 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 MSL3P1-202ENST00000440028 1468 ntBASIC8.32□□□□□ -1.08
TOPBP1Q92547 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TOPBP1Q92547 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOPBP1Q92547 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TOPBP1Q92547 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 TBCAP2-201ENST00000416175 326 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 RAD23BP1-201ENST00000421404 1227 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 RPL7P57-201ENST00000423238 740 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 AC090018.1-201ENST00000434369 367 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 RPL7P32-201ENST00000457119 744 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 AC093840.1-201ENST00000511599 336 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 AC084824.2-201ENST00000548906 345 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms