Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 AC011503.2-201ENST00000594230 1500 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.06□□□□□ -1.6
PKNOX1P55347 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 RN7SKP124-201ENST00000364730 341 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AL390316.1-201ENST00000406279 553 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 RNU2-18P-201ENST00000411224 162 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 OR2AH1P-201ENST00000425717 928 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC100832.1-201ENST00000471945 383 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 RNA5SP373-201ENST00000517271 95 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.06□□□□□ -1.6
PKNOX1P55347 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC087468.1-201ENST00000604365 630 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 AC108359.1-201ENST00000616451 1211 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 MIR8080-201ENST00000622224 89 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 AL359742.1-201ENST00000622497 540 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.06□□□□□ -1.6
PKNOX1P55347 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 SOCS5P3-201ENST00000425115 1576 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 RNF19BPY-201ENST00000458209 1550 ntBASIC5.06□□□□□ -1.6
PKNOX1P55347 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PKNOX1P55347 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKNOX1P55347 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.06□□□□□ -1.6
PKNOX1P55347 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.06□□□□□ -1.6
PKNOX1P55347 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PKNOX1P55347 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AC092747.4-201ENST00000620519 1861 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 AL929601.4-201ENST00000613011 1341 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PKNOX1P55347 RNA5SP339-201ENST00000390987 122 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 RPL10P10-201ENST00000403509 664 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AC073109.1-201ENST00000445066 978 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 RPS27AP2-201ENST00000457576 465 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AL133445.1-201ENST00000467051 452 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AC012400.1-201ENST00000518452 381 ntBASIC5.05□□□□□ -1.6
PKNOX1P55347 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.05□□□□□ -1.6
PKNOX1P55347 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms