Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
BRCA2P51587 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 AP000866.6-201ENST00000638898 3579 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.34□□□□□ -1.55
BRCA2P51587 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
BRCA2P51587 RPS17P17-201ENST00000419392 409 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 AC245028.2-201ENST00000458673 253 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 snoU109.5-201ENST00000516231 132 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCA2P51587 AL356608.1-201ENST00000610034 820 ntBASIC5.34□□□□□ -1.55
BRCA2P51587 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BRCA2P51587 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCA2P51587 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.34□□□□□ -1.56
BRCA2P51587 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.34□□□□□ -1.56
BRCA2P51587 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.56
BRCA2P51587 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
BRCA2P51587 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
BRCA2P51587 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC5.34□□□□□ -1.56
BRCA2P51587 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.34□□□□□ -1.56
BRCA2P51587 CAST-222ENST00000508579 1758 ntTSL 2 BASIC5.33□□□□□ -1.56
BRCA2P51587 UQCRBP1-201ENST00000421129 336 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 RPL7AP25-201ENST00000423357 805 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.33□□□□□ -1.56
BRCA2P51587 AC015795.1-201ENST00000513669 327 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCA2P51587 AC244100.1-202ENST00000621554 382 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BRCA2P51587 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
BRCA2P51587 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BRCA2P51587 SNORD125-201ENST00000459538 96 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.33□□□□□ -1.56
BRCA2P51587 MIR4420-201ENST00000583944 77 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 AC022726.1-201ENST00000587475 207 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 AL356863.1-201ENST00000623378 1080 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 AC012442.3-202ENST00000636742 206 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 AC233968.1-201ENST00000611212 1300 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 AC079097.1-201ENST00000512187 1399 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 VN2R3P-201ENST00000422626 1412 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
BRCA2P51587 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 AC090589.1-201ENST00000473109 362 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCA2P51587 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.33□□□□□ -1.56
BRCA2P51587 RN7SKP83-201ENST00000516512 178 ntBASIC5.33□□□□□ -1.56
BRCA2P51587 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCA2P51587 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
BRCA2P51587 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.33□□□□□ -1.56
BRCA2P51587 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 SPRR2C-201ENST00000290702 219 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 SNORA70.10-201ENST00000384515 134 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCA2P51587 AL117339.2-201ENST00000430475 180 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms