Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.89□□□□□ -0.99
SMARCA4P51532 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SMARCA4P51532 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC8.89□□□□□ -0.99
SMARCA4P51532 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC8.89□□□□□ -0.99
SMARCA4P51532 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.89□□□□□ -0.99
SMARCA4P51532 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SMARCA4P51532 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SMARCA4P51532 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.88□□□□□ -0.99
SMARCA4P51532 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SMARCA4P51532 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SMARCA4P51532 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
SMARCA4P51532 IGKV7-3-201ENST00000357453 298 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 RN7SKP145-201ENST00000363291 303 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 RNA5SP223-201ENST00000365174 120 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.88□□□□□ -0.99
SMARCA4P51532 ATG4AP1-201ENST00000416893 538 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.88□□□□□ -0.99
SMARCA4P51532 BX842559.2-201ENST00000451418 605 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.88□□□□□ -0.99
SMARCA4P51532 RN7SKP248-201ENST00000516278 305 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.88□□□□□ -0.99
SMARCA4P51532 AC021483.2-201ENST00000567415 758 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC8.88□□□□□ -0.99
SMARCA4P51532 AC005191.1-201ENST00000603950 358 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 MIR6133-201ENST00000617057 108 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 RNF123-214ENST00000629802 207 ntTSL 5 BASIC8.88□□□□□ -0.99
SMARCA4P51532 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.88□□□□□ -0.99
SMARCA4P51532 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
SMARCA4P51532 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
SMARCA4P51532 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SMARCA4P51532 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SMARCA4P51532 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.87□□□□□ -0.99
SMARCA4P51532 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 RPS27AP6-201ENST00000427962 448 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 CBX1P1-201ENST00000440184 427 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC022133.1-201ENST00000490961 571 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 IGHVIII-2-1-201ENST00000518843 291 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.87□□□□□ -0.99
SMARCA4P51532 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC005618.4-201ENST00000625053 554 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC007382.1-201ENST00000624376 2618 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.87□□□□□ -0.99
SMARCA4P51532 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC011276.1-201ENST00000469688 323 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC8.87□□□□□ -0.99
SMARCA4P51532 MIR6716-201ENST00000613413 80 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 AL121890.3-201ENST00000618494 516 ntBASIC8.87□□□□□ -0.99
SMARCA4P51532 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SMARCA4P51532 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.87□□□□□ -0.99
SMARCA4P51532 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.86□□□□□ -0.99
SMARCA4P51532 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
SMARCA4P51532 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
SMARCA4P51532 AC009779.8-201ENST00000641684 4384 ntBASIC8.86□□□□□ -0.99
SMARCA4P51532 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
SMARCA4P51532 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.86□□□□□ -0.99
SMARCA4P51532 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
SMARCA4P51532 AL390316.1-201ENST00000406279 553 ntBASIC8.86□□□□□ -0.99
SMARCA4P51532 AC009238.2-201ENST00000431026 355 ntBASIC8.86□□□□□ -0.99
SMARCA4P51532 RPL7AP52-201ENST00000458096 790 ntBASIC8.86□□□□□ -0.99
SMARCA4P51532 CYCSP29-201ENST00000533731 318 ntBASIC8.86□□□□□ -0.99
SMARCA4P51532 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.86□□□□□ -0.99
SMARCA4P51532 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.86□□□□□ -0.99
SMARCA4P51532 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC8.86□□□□□ -0.99
SMARCA4P51532 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SMARCA4P51532 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SMARCA4P51532 AC068446.1-201ENST00000556425 1549 ntBASIC8.86□□□□□ -0.99
SMARCA4P51532 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SMARCA4P51532 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
SMARCA4P51532 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SMARCA4P51532 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.85□□□□□ -0.99
SMARCA4P51532 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SMARCA4P51532 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SMARCA4P51532 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SMARCA4P51532 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SMARCA4P51532 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SMARCA4P51532 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms