Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A1P20908 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A1P20908 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A1P20908 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
COL5A1P20908 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.96□□□□□ -1.62
COL5A1P20908 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A1P20908 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 RNA5SP453-201ENST00000362503 119 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 RPL7P58-201ENST00000402913 758 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AC138761.5-201ENST00000433967 325 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A1P20908 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 PSAT1P4-201ENST00000466500 526 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL5A1P20908 HMGN1P9-201ENST00000515212 298 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A1P20908 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A1P20908 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 MTCYBP13-201ENST00000578634 1093 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC011453.2-201ENST00000603737 729 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AC135068.12-201ENST00000637370 931 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 SNORA70.6-201ENST00000383934 134 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC004690.1-201ENST00000418216 328 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC092570.3-201ENST00000420113 693 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 RPL19P16-201ENST00000433839 588 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AL359265.2-201ENST00000434367 631 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A1P20908 RN7SL197P-201ENST00000466981 299 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 RPL7P41-201ENST00000485823 957 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 AC068724.3-201ENST00000625906 87 ntBASIC4.95□□□□□ -1.62
COL5A1P20908 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL5A1P20908 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A1P20908 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL5A1P20908 TTC41P-205ENST00000551270 3963 ntBASIC4.94□□□□□ -1.62
COL5A1P20908 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A1P20908 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL5A1P20908 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A1P20908 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A1P20908 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL5A1P20908 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL5A1P20908 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A1P20908 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.94□□□□□ -1.62
COL5A1P20908 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A1P20908 OR9G4-201ENST00000302957 984 ntBASIC4.94□□□□□ -1.62
COL5A1P20908 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL5A1P20908 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL5A1P20908 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.94□□□□□ -1.62
COL5A1P20908 GTF2IP5-201ENST00000414608 731 ntBASIC4.94□□□□□ -1.62
COL5A1P20908 AL137845.2-201ENST00000444292 988 ntBASIC4.94□□□□□ -1.62
COL5A1P20908 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.94□□□□□ -1.62
COL5A1P20908 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A1P20908 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A1P20908 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
COL5A1P20908 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A1P20908 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A1P20908 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A1P20908 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms