Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 MIR4742-201ENST00000581069 85 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 AC104785.1-201ENST00000603220 588 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 DPPA3P3-201ENST00000603842 430 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 AL133173.2-201ENST00000614270 90 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 AC087588.2-201ENST00000617667 426 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 AC233309.1-201ENST00000619522 751 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 AC138915.4-201ENST00000565549 4147 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 AC112255.1-201ENST00000624070 2493 ntBASIC8.05□□□□□ -1.12
RCCD1A6NED2 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.05□□□□□ -1.12
RCCD1A6NED2 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RCCD1A6NED2 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AP002907.1-201ENST00000606361 1430 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 Y_RNA.452-201ENST00000384202 108 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 RNU6-769P-201ENST00000384407 104 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 MIR575-201ENST00000385013 94 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 MIR498-201ENST00000385134 124 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 PHBP1-201ENST00000392260 808 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 RPL32P23-201ENST00000397237 405 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 RN7SKP240-201ENST00000410583 375 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 NPM1P40-201ENST00000412758 733 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AL136133.1-201ENST00000413694 376 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 VDAC1P10-201ENST00000416715 891 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 RBMY2FP-202ENST00000420346 1263 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 SETP9-201ENST00000423837 832 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AL122003.1-201ENST00000435206 784 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SNRPEP7-201ENST00000438350 220 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 UBE2V1P5-201ENST00000440070 405 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 NDUFA5P7-201ENST00000452914 242 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC087385.2-201ENST00000477729 498 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC026782.1-201ENST00000512952 449 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 Vault.3-201ENST00000516676 95 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 RNU6-1003P-201ENST00000517099 105 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 HMGB1P23-201ENST00000518743 568 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 COX6CP5-201ENST00000527162 228 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC138749.2-201ENST00000566048 167 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 PPIAP14-201ENST00000577627 496 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 MIR548Y-201ENST00000582739 110 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC009597.2-201ENST00000604659 592 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 BCRP9-201ENST00000605312 388 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC103710.3-201ENST00000608157 948 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 AC078899.5-201ENST00000612475 178 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.04□□□□□ -1.12
RCCD1A6NED2 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms