Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 FLJ42393-201ENST00000623801 2270 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 Y_RNA.158-201ENST00000363651 101 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 RNU4-1-201ENST00000363925 141 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 Y_RNA.339-201ENST00000365325 102 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 Y_RNA.557-201ENST00000384680 107 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 MIR320B1-201ENST00000390209 79 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 FAM103A2P-201ENST00000444122 354 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 YWHAEP1-201ENST00000453697 763 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 RN7SL505P-201ENST00000482644 293 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC018695.1-201ENST00000484096 664 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 OR4D12P-201ENST00000509361 911 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 SNORA70.23-201ENST00000517218 151 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 RN7SKP295-201ENST00000517264 153 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 IGKV3-34-201ENST00000521692 293 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 MRPS16P1-201ENST00000523462 412 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AP004245.1-201ENST00000530434 259 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 OR5B10P-201ENST00000532869 642 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC090751.1-201ENST00000566966 267 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC010719.1-201ENST00000602992 747 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC008782.1-201ENST00000603386 430 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC018737.1-201ENST00000603900 204 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AL356052.1-201ENST00000605764 376 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC239859.6-201ENST00000622095 213 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC091953.2-201ENST00000623979 160 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC091953.4-201ENST00000625179 341 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USB1Q9BQ65 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 AC007996.1-201ENST00000620414 2821 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 TNFSF15-201ENST00000374044 2789 ntBASIC7.34□□□□□ -1.23
USB1Q9BQ65 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.34□□□□□ -1.23
USB1Q9BQ65 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.24
USB1Q9BQ65 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
USB1Q9BQ65 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC7.34□□□□□ -1.24
USB1Q9BQ65 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
USB1Q9BQ65 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 OR52B5P-204ENST00000641744 3467 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL391262.1-201ENST00000556558 1992 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC090337.1-201ENST00000579651 2074 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms