Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 RN7SKP59-201ENST00000410520 314 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AL133325.1-201ENST00000421090 382 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 CYCSP12-201ENST00000437729 300 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 RPS11P7-201ENST00000442125 465 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AL133445.1-201ENST00000467051 452 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC022133.1-201ENST00000490961 571 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 RPS24P16-201ENST00000497294 392 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC112184.1-201ENST00000505179 312 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC100784.1-201ENST00000522790 310 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 HMGB1P40-201ENST00000525121 540 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AP004607.2-201ENST00000533949 322 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 MIR3936-201ENST00000584304 110 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 AC104260.2-201ENST00000623551 3497 ntBASIC4.98□□□□□ -1.61
COL21A1Q96P44 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.98□□□□□ -1.61
COL21A1Q96P44 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL21A1Q96P44 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AL731532.2-201ENST00000623542 1953 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 RNU1-77P-201ENST00000390868 162 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC079355.1-201ENST00000421770 223 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 DSTNP5-201ENST00000427921 523 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC124944.2-201ENST00000429866 1242 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 CYCSP6-201ENST00000434498 302 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 CYCSP24-201ENST00000445119 316 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 GAPDHP25-201ENST00000447061 1001 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 RPL15P21-201ENST00000495592 567 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 KATNBL1P4-201ENST00000503545 918 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 GOLGA5P1-201ENST00000507317 980 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 ATP5LP3-201ENST00000514223 304 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC022360.1-201ENST00000521058 340 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AP006245.2-201ENST00000522004 300 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 IGKV2-18-201ENST00000522607 343 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC127381.1-201ENST00000555979 939 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AL359513.1-201ENST00000614364 557 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 AC074101.1-201ENST00000637861 241 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL21A1Q96P44 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.97□□□□□ -1.61
COL21A1Q96P44 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL21A1Q96P44 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL21A1Q96P44 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
COL21A1Q96P44 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
COL21A1Q96P44 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
COL21A1Q96P44 AC004817.4-201ENST00000602396 3625 ntBASIC4.96□□□□□ -1.61
COL21A1Q96P44 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL21A1Q96P44 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL21A1Q96P44 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 RNA5SP487-201ENST00000410186 122 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 NPM1P4-201ENST00000414095 812 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 LYPLA1P1-201ENST00000434514 622 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 AL035090.1-201ENST00000454835 332 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 RNU7-157P-201ENST00000459600 66 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms