Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
EPHB3P54753 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 GUCY1B2-204ENST00000531898 1979 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC012020.1-201ENST00000624541 1728 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 RNA5SP510-201ENST00000364697 99 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 Y_RNA.472-201ENST00000384322 102 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
EPHB3P54753 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 AL357520.1-201ENST00000441557 453 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.51□□□□□ -1.37
EPHB3P54753 ELOCP23-201ENST00000452014 332 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC008280.2-201ENST00000455473 307 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.51□□□□□ -1.37
EPHB3P54753 SYPL1P1-201ENST00000473622 768 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC079203.1-201ENST00000487972 404 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 AC010424.1-201ENST00000506336 297 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC006499.4-201ENST00000510947 694 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 RNA5SP434-201ENST00000516647 121 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 RNU6-759P-201ENST00000516740 103 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.51□□□□□ -1.37
EPHB3P54753 AP005205.1-201ENST00000563503 508 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 CBX3P2-202ENST00000583365 535 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC107982.3-201ENST00000584957 985 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC090236.2-201ENST00000587933 1101 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.51□□□□□ -1.37
EPHB3P54753 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC009237.12-201ENST00000604755 742 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AP000255.1-201ENST00000610276 676 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC073114.1-201ENST00000612027 490 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AL158063.1-201ENST00000615349 536 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC124312.6-202ENST00000623624 418 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC073488.3-201ENST00000631611 778 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC129915.3-201ENST00000634128 948 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC068137.3-201ENST00000639191 341 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 AC073869.6-201ENST00000640656 341 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
EPHB3P54753 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 AC009135.2-201ENST00000624136 1768 ntBASIC6.51□□□□□ -1.37
EPHB3P54753 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
EPHB3P54753 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
EPHB3P54753 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
EPHB3P54753 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.5□□□□□ -1.37
EPHB3P54753 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 RBMY1HP-201ENST00000382759 1389 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
EPHB3P54753 FAM133CP-201ENST00000332869 704 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC245096.1-201ENST00000413104 546 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 AC246680.2-201ENST00000422106 389 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.5□□□□□ -1.37
EPHB3P54753 NAP1L4P2-201ENST00000425958 899 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC244035.1-201ENST00000430042 390 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
EPHB3P54753 Z74696.2-201ENST00000436514 498 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 RBMX2P4-201ENST00000441256 376 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC016908.1-201ENST00000442571 1219 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AC011742.2-201ENST00000443818 352 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 TRIM60P16-201ENST00000444048 694 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 GAPDHP23-201ENST00000444823 993 ntBASIC6.5□□□□□ -1.37
EPHB3P54753 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.5□□□□□ -1.37
EPHB3P54753 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms