Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AP005229.2-201ENST00000609980 697 ntBASIC6.01□□□□□ -1.45
COPAP53621 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 AC022467.1-201ENST00000614738 749 ntBASIC6.01□□□□□ -1.45
COPAP53621 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.01□□□□□ -1.45
COPAP53621 AC099654.9-201ENST00000637055 678 ntBASIC6.01□□□□□ -1.45
COPAP53621 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 MIR193BHG-214ENST00000641765 509 ntBASIC6.01□□□□□ -1.45
COPAP53621 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.01□□□□□ -1.45
COPAP53621 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 PDZK1P1-202ENST00000425209 1350 ntBASIC6.01□□□□□ -1.45
COPAP53621 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COPAP53621 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COPAP53621 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 AC138907.8-201ENST00000623981 2256 ntBASIC6.01□□□□□ -1.45
COPAP53621 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.01□□□□□ -1.45
COPAP53621 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 AC019072.1-201ENST00000604535 1551 ntBASIC6.01□□□□□ -1.45
COPAP53621 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPAP53621 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
COPAP53621 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COPAP53621 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
COPAP53621 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6□□□□□ -1.45
COPAP53621 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6□□□□□ -1.45
COPAP53621 RN7SKP293-201ENST00000411389 296 ntBASIC6□□□□□ -1.45
COPAP53621 AL024507.1-201ENST00000412741 274 ntBASIC6□□□□□ -1.45
COPAP53621 PTCD2P2-201ENST00000415579 1095 ntBASIC6□□□□□ -1.45
COPAP53621 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 AC006065.1-201ENST00000422539 802 ntBASIC6□□□□□ -1.45
COPAP53621 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPAP53621 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6□□□□□ -1.45
COPAP53621 BX119904.1-201ENST00000432026 348 ntBASIC6□□□□□ -1.45
COPAP53621 YWHAEP1-201ENST00000453697 763 ntBASIC6□□□□□ -1.45
COPAP53621 RAB28P2-201ENST00000454299 641 ntBASIC6□□□□□ -1.45
COPAP53621 AC104164.1-201ENST00000460282 590 ntBASIC6□□□□□ -1.45
COPAP53621 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6□□□□□ -1.45
COPAP53621 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPAP53621 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6□□□□□ -1.45
COPAP53621 YWHAZP1-201ENST00000556286 722 ntBASIC6□□□□□ -1.45
COPAP53621 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 CD24P2-201ENST00000565486 219 ntBASIC6□□□□□ -1.45
COPAP53621 FAM106CP-201ENST00000582212 507 ntBASIC6□□□□□ -1.45
COPAP53621 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6□□□□□ -1.45
COPAP53621 AC005034.4-201ENST00000603612 899 ntBASIC6□□□□□ -1.45
COPAP53621 FAM27E4-201ENST00000605259 342 ntBASIC6□□□□□ -1.45
COPAP53621 AC063944.3-201ENST00000609969 533 ntBASIC6□□□□□ -1.45
COPAP53621 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6□□□□□ -1.45
COPAP53621 AC008759.3-201ENST00000613300 508 ntBASIC6□□□□□ -1.45
COPAP53621 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6□□□□□ -1.45
COPAP53621 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 AL049767.1-202ENST00000637826 242 ntBASIC6□□□□□ -1.45
COPAP53621 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPAP53621 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6□□□□□ -1.45
COPAP53621 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPAP53621 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPAP53621 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6□□□□□ -1.45
COPAP53621 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
COPAP53621 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COPAP53621 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
COPAP53621 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COPAP53621 AC020656.2-201ENST00000613291 5309 ntBASIC6□□□□□ -1.45
COPAP53621 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6□□□□□ -1.45
COPAP53621 AC079298.1-201ENST00000625026 1619 ntBASIC5.99□□□□□ -1.45
COPAP53621 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
COPAP53621 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COPAP53621 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COPAP53621 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COPAP53621 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPAP53621 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPAP53621 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPAP53621 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COPAP53621 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COPAP53621 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.99□□□□□ -1.45
COPAP53621 MIR122-201ENST00000385044 85 ntBASIC5.99□□□□□ -1.45
COPAP53621 AC104297.1-201ENST00000393779 870 ntBASIC5.99□□□□□ -1.45
COPAP53621 Z68694.1-201ENST00000413929 841 ntBASIC5.99□□□□□ -1.45
COPAP53621 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.99□□□□□ -1.45
COPAP53621 AL513325.1-201ENST00000417716 1034 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms