Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC12P31275 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC12P31275 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC12P31275 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXC12P31275 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC12P31275 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXC12P31275 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 AC092111.1-201ENST00000618256 3358 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
HOXC12P31275 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXC12P31275 RNU4-21P-201ENST00000362802 126 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 RN7SKP107-201ENST00000364157 290 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXC12P31275 RNU2-42P-201ENST00000410697 113 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 MTCYBP5-201ENST00000423752 1135 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 HMGB3P10-201ENST00000434734 572 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 RPS18P1-201ENST00000447840 458 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 NPM1P49-201ENST00000448027 714 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 COX6CP18-201ENST00000448769 222 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AL591363.1-201ENST00000450091 483 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 RPL36AP33-201ENST00000450395 310 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AC016724.1-201ENST00000453215 421 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 MTCYBP1-201ENST00000454315 1119 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 CFTRP1-201ENST00000456646 183 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 RN7SL160P-201ENST00000468558 284 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 MARK2P8-201ENST00000476069 952 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 RPS4XP23-201ENST00000487801 237 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC12P31275 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 AP001000.1-201ENST00000526843 742 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC12P31275 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC12P31275 GTF2IP8-201ENST00000560687 584 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 MIR4312-201ENST00000579909 76 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC12P31275 AL390838.2-201ENST00000602394 274 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AC007255.2-201ENST00000604053 631 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 AL031667.3-201ENST00000620124 655 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.14□□□□□ -1.43
HOXC12P31275 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXC12P31275 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC12P31275 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HOXC12P31275 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC12P31275 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC12P31275 AC011416.1-201ENST00000514947 1732 ntBASIC6.13□□□□□ -1.43
HOXC12P31275 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXC12P31275 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXC12P31275 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC12P31275 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC12P31275 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC12P31275 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC12P31275 AC107021.2-201ENST00000567714 2095 ntBASIC6.13□□□□□ -1.43
HOXC12P31275 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC12P31275 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXC12P31275 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXC12P31275 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC12P31275 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC12P31275 Y_RNA.18-201ENST00000362461 102 ntBASIC6.13□□□□□ -1.43
HOXC12P31275 RN7SKP250-201ENST00000363924 321 ntBASIC6.13□□□□□ -1.43
HOXC12P31275 SNORA4.1-201ENST00000364263 144 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms