Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR1289-1-201ENST00000408836 144 ntBASIC2.2□□□□□ -2.06
USH2AO75445 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 OR1H1P-201ENST00000448731 937 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AC068522.1-201ENST00000482895 345 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.2□□□□□ -2.06
USH2AO75445 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.2□□□□□ -2.06
USH2AO75445 AC084757.4-201ENST00000616350 526 ntBASIC2.2□□□□□ -2.06
USH2AO75445 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 AC104447.1-201ENST00000624214 2124 ntBASIC2.19□□□□□ -2.06
USH2AO75445 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
USH2AO75445 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 AC106871.1-201ENST00000568324 3102 ntBASIC2.19□□□□□ -2.06
USH2AO75445 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 MIR183-201ENST00000384958 110 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AC006326.1-201ENST00000445465 787 ntBASIC2.19□□□□□ -2.06
USH2AO75445 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC2.19□□□□□ -2.06
USH2AO75445 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.19□□□□□ -2.06
USH2AO75445 AC005899.7-201ENST00000618199 588 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 NEK3-211ENST00000629912 141 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
USH2AO75445 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 UGT2B24P-201ENST00000514441 1597 ntBASIC2.19□□□□□ -2.06
USH2AO75445 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 AL121839.2-201ENST00000565058 6943 ntBASIC2.19□□□□□ -2.06
USH2AO75445 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 AC005034.3-201ENST00000604845 1747 ntBASIC2.19□□□□□ -2.06
USH2AO75445 MIR34B-201ENST00000385076 84 ntBASIC2.19□□□□□ -2.06
USH2AO75445 BX510359.2-201ENST00000417920 305 ntBASIC2.19□□□□□ -2.06
USH2AO75445 NPM1P34-201ENST00000428821 893 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AL445584.1-201ENST00000431451 330 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AL354714.3-201ENST00000447284 493 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AL451063.1-201ENST00000450164 1133 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 AC090136.1-201ENST00000520009 240 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.19□□□□□ -2.06
USH2AO75445 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
USH2AO75445 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.19□□□□□ -2.06
USH2AO75445 AL121772.2-201ENST00000614331 297 ntBASIC2.19□□□□□ -2.06
USH2AO75445 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 AC074101.1-201ENST00000637861 241 ntBASIC2.19□□□□□ -2.06
USH2AO75445 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 AC015799.1-201ENST00000622996 3122 ntBASIC2.19□□□□□ -2.06
USH2AO75445 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.19□□□□□ -2.06
USH2AO75445 RPS5P7-201ENST00000456664 608 ntBASIC2.19□□□□□ -2.06
USH2AO75445 RN7SL98P-201ENST00000462271 300 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AC023818.1-201ENST00000498379 384 ntBASIC2.19□□□□□ -2.06
USH2AO75445 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC2.19□□□□□ -2.06
USH2AO75445 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.19□□□□□ -2.06
USH2AO75445 CR381572.2-201ENST00000624852 397 ntBASIC2.19□□□□□ -2.06
USH2AO75445 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms