Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 LY96-202ENST00000518893 430 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF40O75150 AC107953.1-201ENST00000522216 297 ntBASIC8.22□□□□□ -1.09
RNF40O75150 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 SCOCP1-201ENST00000554676 349 ntBASIC8.22□□□□□ -1.09
RNF40O75150 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.22□□□□□ -1.09
RNF40O75150 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF40O75150 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF40O75150 ZNF322P1-201ENST00000568013 1209 ntBASIC8.22□□□□□ -1.09
RNF40O75150 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 MIR4642-201ENST00000583943 82 ntBASIC8.22□□□□□ -1.09
RNF40O75150 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.22□□□□□ -1.09
RNF40O75150 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF40O75150 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
RNF40O75150 AC100810.6-201ENST00000638068 285 ntBASIC8.22□□□□□ -1.09
RNF40O75150 CASC19-212ENST00000641153 1287 ntBASIC8.22□□□□□ -1.09
RNF40O75150 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF40O75150 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF40O75150 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 MTCO1P25-201ENST00000414449 1799 ntBASIC8.22□□□□□ -1.09
RNF40O75150 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF40O75150 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.21□□□□□ -1.09
RNF40O75150 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.21□□□□□ -1.09
RNF40O75150 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.21□□□□□ -1.09
RNF40O75150 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF40O75150 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RNF40O75150 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.21□□□□□ -1.09
RNF40O75150 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF40O75150 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF40O75150 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF40O75150 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.21□□□□□ -1.09
RNF40O75150 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RNF40O75150 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 RNA5SP463-201ENST00000363030 120 ntBASIC8.21□□□□□ -1.1
RNF40O75150 SNORA30B-201ENST00000365319 129 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RNU1-39P-201ENST00000383897 165 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RNU6-533P-201ENST00000384144 107 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RNA5SP18-201ENST00000390935 121 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RPL32P23-201ENST00000397237 405 ntBASIC8.21□□□□□ -1.1
RNF40O75150 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RNU2-3P-201ENST00000410144 191 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RNU6-77P-201ENST00000410554 91 ntBASIC8.21□□□□□ -1.1
RNF40O75150 MTND3P8-201ENST00000412909 339 ntBASIC8.21□□□□□ -1.1
RNF40O75150 AC013404.1-201ENST00000413068 249 ntBASIC8.21□□□□□ -1.1
RNF40O75150 SNRPFP1-201ENST00000414761 252 ntBASIC8.21□□□□□ -1.1
RNF40O75150 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.21□□□□□ -1.1
RNF40O75150 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF40O75150 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF40O75150 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF40O75150 AC239798.1-201ENST00000449024 1176 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RN7SL740P-201ENST00000467060 344 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RPS4XP17-201ENST00000479057 754 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RN7SL647P-201ENST00000485429 300 ntBASIC8.21□□□□□ -1.1
RNF40O75150 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF40O75150 AC005741.1-201ENST00000511094 432 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF40O75150 RN7SKP2-201ENST00000517003 319 ntBASIC8.21□□□□□ -1.1
RNF40O75150 AC023050.3-201ENST00000541142 333 ntBASIC8.21□□□□□ -1.1
RNF40O75150 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC8.21□□□□□ -1.1
RNF40O75150 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.21□□□□□ -1.1
RNF40O75150 AC068790.5-201ENST00000602741 355 ntBASIC8.21□□□□□ -1.1
RNF40O75150 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.21□□□□□ -1.1
RNF40O75150 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 AC009268.2-201ENST00000621925 457 ntBASIC8.21□□□□□ -1.1
RNF40O75150 AP006248.2-201ENST00000623309 592 ntBASIC8.21□□□□□ -1.1
RNF40O75150 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RNF40O75150 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 NCOA4P3-201ENST00000513203 1877 ntBASIC8.21□□□□□ -1.1
RNF40O75150 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
RNF40O75150 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 MTND4P35-201ENST00000604257 1375 ntBASIC8.21□□□□□ -1.1
RNF40O75150 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RNF40O75150 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 NF1P8-201ENST00000415351 1461 ntBASIC8.2□□□□□ -1.1
RNF40O75150 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RNF40O75150 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
RNF40O75150 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 RNU6-462P-201ENST00000362659 105 ntBASIC8.2□□□□□ -1.1
RNF40O75150 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RNF40O75150 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms