Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 SNORA2C-201ENST00000408564 137 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RN7SKP89-201ENST00000410774 242 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC073264.1-201ENST00000411508 416 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007390.1-201ENST00000415722 356 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 SNX18P3-201ENST00000424993 835 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC130472.1-201ENST00000427885 309 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC109583.1-201ENST00000432156 268 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC005040.1-201ENST00000437783 482 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC099563.1-201ENST00000456086 418 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 VN1R6P-201ENST00000458417 907 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RN7SL223P-201ENST00000470401 294 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 SNORA48.10-201ENST00000516965 160 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC022832.1-201ENST00000530718 645 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 DNM1P31-201ENST00000564149 696 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RPS3AP23-202ENST00000574601 686 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC011840.5-201ENST00000582125 771 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 SNRPCP20-201ENST00000588011 210 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AP000942.4-201ENST00000604811 241 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AL022238.3-201ENST00000609279 443 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AL442067.2-201ENST00000614033 363 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RN7SL820P-201ENST00000616437 299 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC018558.4-201ENST00000622153 281 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AP003068.4-201ENST00000623192 802 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC016582.3-206ENST00000636547 207 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC233280.20-201ENST00000637412 416 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AL596275.2-203ENST00000641951 371 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC093311.1-201ENST00000506586 2021 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC079949.2-201ENST00000617117 2933 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AC138915.3-201ENST00000562908 1389 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC012213.2-201ENST00000562917 4597 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC069222.1-201ENST00000608028 3360 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 PPIAP22-201ENST00000358455 498 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RNU1-16P-201ENST00000365477 164 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.409-201ENST00000383990 98 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.481-201ENST00000384373 102 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RNU6-809P-201ENST00000384461 107 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR506-201ENST00000384998 124 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms