Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 DSTNP5-201ENST00000427921 523 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC012075.1-201ENST00000436549 580 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RPS11P7-201ENST00000442125 465 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 PRPF38AP1-201ENST00000451976 933 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 MTND6P32-201ENST00000457611 483 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RPL35AP19-201ENST00000469425 329 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RN7SL273P-201ENST00000481561 299 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RPL7P41-201ENST00000485823 957 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RN7SL447P-201ENST00000494711 245 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RN7SL466P-201ENST00000497546 295 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 PRPF19P1-201ENST00000584766 898 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC009597.2-201ENST00000604659 592 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC003985.2-201ENST00000562268 1669 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC022417.1-201ENST00000624768 1303 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC023421.1-201ENST00000590535 1785 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 THAP12P8-201ENST00000447914 2115 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 OR9K1P-201ENST00000326513 941 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC005294.1-201ENST00000355509 281 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RNU6-729P-201ENST00000384399 107 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 COX5BP7-201ENST00000414780 274 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 PCNPP4-201ENST00000414817 517 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RPL7P40-201ENST00000481703 745 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RN7SL814P-201ENST00000487715 300 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC040958.1-201ENST00000561102 201 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 RBM22P1-201ENST00000578589 1214 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 WBP1LP8-201ENST00000617401 327 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 AC006840.1-201ENST00000623069 542 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 MUC2-202ENST00000613187 4845 ntBASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC40Q9H9A6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AL034549.2-201ENST00000618285 3373 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC007618.1-201ENST00000366455 732 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 MIR589-201ENST00000385238 99 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 EI24P3-201ENST00000399046 1062 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 RPL12P9-201ENST00000412942 488 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 RAB9AP4-201ENST00000415230 609 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC002069.1-201ENST00000429649 1159 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 NOP56P2-201ENST00000447491 769 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 NPM1P19-201ENST00000450070 712 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 RPL7P45-201ENST00000455851 743 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC107015.1-201ENST00000466902 747 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 573.5 ms