Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC008427.1-201ENST00000503102 655 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.37□□□□□ -1.39
HPS3Q969F9 BTG4P1-201ENST00000510421 183 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.37□□□□□ -1.39
HPS3Q969F9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.37□□□□□ -1.39
HPS3Q969F9 AP004609.2-201ENST00000532177 190 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HPS3Q969F9 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.37□□□□□ -1.39
HPS3Q969F9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.37□□□□□ -1.39
HPS3Q969F9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.37□□□□□ -1.39
HPS3Q969F9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.37□□□□□ -1.39
HPS3Q969F9 AC011492.1-201ENST00000600023 315 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 FAM27E4-201ENST00000605259 342 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AC245100.7-201ENST00000609678 442 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 DUXAP10-204ENST00000612052 616 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AP000770.2-201ENST00000623694 100 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.37□□□□□ -1.39
HPS3Q969F9 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.37□□□□□ -1.39
HPS3Q969F9 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.37□□□□□ -1.39
HPS3Q969F9 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HPS3Q969F9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 NEPNP-201ENST00000404786 1371 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC234772.1-201ENST00000377927 937 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 RNU6-481P-201ENST00000384194 107 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 MIR130A-201ENST00000385274 89 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HPS3Q969F9 OR13Z1P-201ENST00000416141 834 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 OR2AF1P-201ENST00000454899 889 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC093719.1-201ENST00000480427 441 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC099521.1-201ENST00000482557 334 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 GAPDHP71-201ENST00000511530 1003 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC133963.2-201ENST00000513686 578 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC060775.1-201ENST00000518241 520 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 HMGN2P36-201ENST00000529541 409 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 TRIM51DP-201ENST00000529746 596 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.36□□□□□ -1.39
HPS3Q969F9 HSPE1P2-201ENST00000554777 306 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC092121.1-201ENST00000569452 202 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC067773.1-201ENST00000603284 1094 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 HIRAP1-201ENST00000605318 787 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.36□□□□□ -1.39
HPS3Q969F9 OR7A19P-201ENST00000608051 733 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AL365181.4-201ENST00000609800 547 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC008993.2-201ENST00000631744 806 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC000095.2-202ENST00000637415 154 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC008691.1-209ENST00000642094 814 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.36□□□□□ -1.39
HPS3Q969F9 HSPD1P11-201ENST00000508643 1702 ntBASIC6.36□□□□□ -1.39
HPS3Q969F9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.36□□□□□ -1.39
HPS3Q969F9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HPS3Q969F9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms