Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC063976.2-201ENST00000425667 3556 ntBASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 ICE2P1-201ENST00000512800 1849 ntBASIC4.4□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SKP124-201ENST00000364730 341 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 RNA5SP223-201ENST00000365174 120 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 RN7SKP293-201ENST00000411389 296 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AL390119.1-201ENST00000440329 312 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AL157385.1-201ENST00000446973 268 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC105399.1-202ENST00000447303 205 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 UGT2A3P7-201ENST00000510485 734 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC006272.2-201ENST00000594725 163 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC104695.2-201ENST00000605056 775 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AC073869.10-201ENST00000642016 354 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 BRAFP1-201ENST00000445336 2703 ntBASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTN4IP1Q8WWV3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 TCP1P3-201ENST00000414406 1498 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC133552.1-201ENST00000569988 4007 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RNA5SP234-201ENST00000363916 119 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 MIR589-201ENST00000385238 99 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AL391422.1-201ENST00000402155 436 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RNU6-233P-201ENST00000410845 141 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RPSAP41-201ENST00000439695 860 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 BX842559.2-201ENST00000451418 605 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RN7SL466P-201ENST00000497546 295 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC090638.1-201ENST00000498296 909 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 HMGB1P44-201ENST00000508597 572 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 RNU6-513P-201ENST00000516104 104 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC021733.2-201ENST00000518830 497 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 BNIP3P1-201ENST00000547295 580 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC105036.1-201ENST00000566222 271 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC005341.1-201ENST00000571086 708 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 MIR3936-201ENST00000584304 110 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 BX005214.3-202ENST00000619809 325 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 AC026124.2-201ENST00000621847 656 ntBASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN4IP1Q8WWV3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN4IP1Q8WWV3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms