Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNA5SP394-201ENST00000364216 119 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 RN7SKP292-201ENST00000365522 317 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 BMS1P3-201ENST00000372011 932 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 RNA5SP91-201ENST00000390902 119 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 HMGB1P20-201ENST00000402555 677 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AL158827.1-201ENST00000416300 391 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC093155.2-201ENST00000420734 937 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC127526.2-201ENST00000426436 775 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 GAPDHP48-201ENST00000436626 961 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 RPS15AP29-201ENST00000445539 400 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 RPL12P39-201ENST00000455456 496 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 UBFD1P1-201ENST00000473259 814 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC020779.1-201ENST00000478757 796 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC087672.1-201ENST00000479876 766 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 PCNAP1-201ENST00000505363 709 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 RNU6-615P-201ENST00000516065 106 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 MIR3614-201ENST00000581261 86 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC008521.2-201ENST00000591021 259 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC005021.1-201ENST00000608730 355 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC006213.5-201ENST00000619673 288 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AC090017.1-201ENST00000548612 1779 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC009313.2-201ENST00000417893 1941 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC009229.4-201ENST00000623854 1947 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AL031985.1-201ENST00000392713 418 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC093719.1-202ENST00000392735 373 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 GSTA12P-201ENST00000402398 508 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 OR2AT2P-201ENST00000413438 905 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AL590609.2-201ENST00000421430 368 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 OR10T1P-201ENST00000424327 947 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 ZFAND6P1-201ENST00000434138 605 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AL353597.2-202ENST00000434901 373 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 RPL5P13-201ENST00000462840 709 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 RN7SL515P-201ENST00000463999 297 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 RPS3AP15-201ENST00000483874 781 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 PPIAP19-201ENST00000486414 492 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 SNORA43.3-201ENST00000517240 103 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 DPPA2P4-201ENST00000563717 878 ntBASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP54Q7Z3B4 AC015908.5-201ENST00000623289 343 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms