Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PTTG3P-201ENST00000521862 606 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AP003080.1-202ENST00000526526 915 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 MIR4637-201ENST00000582405 84 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC007448.1-201ENST00000582714 234 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC009233.1-201ENST00000616477 371 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 MIR6811-201ENST00000620409 58 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 MFSD8-218ENST00000641186 4448 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 CCAT2-201ENST00000630920 1752 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 CASC19-246ENST00000641625 1606 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 RNU6-332P-201ENST00000391193 108 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 RN7SKP232-201ENST00000410170 290 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 RNU2-17P-201ENST00000410290 190 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 GM2AP2-201ENST00000491764 562 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC011411.1-201ENST00000509592 876 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 COX6B1P4-201ENST00000519826 484 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC036111.2-201ENST00000533247 901 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC006960.3-201ENST00000561845 705 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 VN1R81P-201ENST00000602085 372 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC106900.2-201ENST00000604994 317 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 MIR7844-201ENST00000616161 122 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC096992.2-201ENST00000609553 1684 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC026464.2-201ENST00000567834 2421 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RC3H1Q5TC82 NXF4-202ENST00000416098 1465 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 TEX21P-201ENST00000447107 1476 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AC009948.5-201ENST00000624360 4406 ntBASIC8.45□□□□□ -1.06
RC3H1Q5TC82 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RC3H1Q5TC82 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms