Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 SNORA70.6-201ENST00000383934 134 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AP000357.1-201ENST00000409926 1165 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.56□□□□□ -1.52
NR1H2P55055 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 AL157884.1-201ENST00000424561 454 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NR1H2P55055 RPS29P14-201ENST00000431518 171 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 GXYLT1P1-201ENST00000446657 490 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 RPL7P55-201ENST00000450522 746 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 CYCSP42-201ENST00000450823 238 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 RPS20P4-201ENST00000461659 355 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 RPL23AP40-201ENST00000487630 390 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 RPS27AP16-201ENST00000492222 470 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 PRMT5P1-201ENST00000514351 598 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC020937.1-201ENST00000519677 1013 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 IGHV4-55-201ENST00000520889 368 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC027369.2-201ENST00000528030 440 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.56□□□□□ -1.52
NR1H2P55055 BNIP3P35-201ENST00000604530 490 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AC026790.2-201ENST00000606282 430 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 MIR8084-201ENST00000614105 89 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC018926.1-201ENST00000616335 435 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AC026124.2-201ENST00000621847 656 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NR1H2P55055 SNX18P12-201ENST00000624821 759 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AC010329.2-201ENST00000595195 2737 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 AC092079.1-201ENST00000558620 1985 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NR1H2P55055 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 AC005005.4-201ENST00000623789 16698 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.56□□□□□ -1.52
NR1H2P55055 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 RNU1-146P-201ENST00000364015 165 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 AC004386.1-201ENST00000393214 761 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 RN7SKP281-201ENST00000410472 352 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 RN7SKP166-201ENST00000410812 305 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 DHFRP2-201ENST00000414224 547 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 MTCO3P21-201ENST00000430791 643 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 FHP1-201ENST00000442741 703 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC097499.1-201ENST00000444277 208 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC069540.1-201ENST00000446320 988 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 NPM1P39-201ENST00000449818 867 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 RPL21P6-201ENST00000479171 504 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 RPL7AP10-201ENST00000481016 791 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 CAB39P1-201ENST00000502277 460 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 FTH1P11-201ENST00000517577 551 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 AC007346.2-201ENST00000564816 892 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC022884.3-201ENST00000579571 248 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.55□□□□□ -1.52
NR1H2P55055 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 AL139022.2-201ENST00000606934 443 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AP001437.1-201ENST00000608783 456 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 FAM27E2-201ENST00000619668 403 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms