Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC3P19447 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.51□□□□□ -1.21
ERCC3P19447 AKAP17BP-201ENST00000431706 2719 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 ECM1P2-201ENST00000503354 1577 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 AC007114.2-201ENST00000576014 4281 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ERCC3P19447 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 RN7SKP275-201ENST00000364626 301 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ERCC3P19447 RNU6-157P-201ENST00000383957 107 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 RN7SKP59-201ENST00000410520 314 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.5□□□□□ -1.21
ERCC3P19447 GAPDHP49-201ENST00000421421 961 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 AL365203.2-201ENST00000423444 196 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 AL354707.3-201ENST00000427308 331 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 VN1R108P-201ENST00000431580 830 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 GSTA7P-201ENST00000438425 448 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 ARL4AP3-201ENST00000441452 574 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC7.5□□□□□ -1.21
ERCC3P19447 MTND1P29-201ENST00000448112 647 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 AL445669.2-201ENST00000454425 421 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AL133351.3-201ENST00000454998 193 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC026348.1-201ENST00000462549 1053 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC117395.1-201ENST00000487390 403 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC021146.8-201ENST00000507455 733 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.5□□□□□ -1.21
ERCC3P19447 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.5□□□□□ -1.21
ERCC3P19447 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 AL162632.2-201ENST00000553933 399 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 DUXAP1-201ENST00000556632 463 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.5□□□□□ -1.21
ERCC3P19447 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.5□□□□□ -1.21
ERCC3P19447 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.5□□□□□ -1.21
ERCC3P19447 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.5□□□□□ -1.21
ERCC3P19447 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 RPSAP75-201ENST00000605848 301 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AL450489.1-201ENST00000612071 468 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 MIR6811-201ENST00000620409 58 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 AC092608.3-201ENST00000625017 386 ntBASIC7.5□□□□□ -1.21
ERCC3P19447 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.5□□□□□ -1.21
ERCC3P19447 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
ERCC3P19447 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.5□□□□□ -1.21
ERCC3P19447 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ERCC3P19447 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
ERCC3P19447 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
ERCC3P19447 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
ERCC3P19447 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
ERCC3P19447 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.49□□□□□ -1.21
ERCC3P19447 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
ERCC3P19447 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.49□□□□□ -1.21
ERCC3P19447 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
ERCC3P19447 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.49□□□□□ -1.21
ERCC3P19447 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ERCC3P19447 DPPA2P2-201ENST00000418220 897 ntBASIC7.49□□□□□ -1.21
ERCC3P19447 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.49□□□□□ -1.21
ERCC3P19447 AL593851.1-201ENST00000426171 157 ntBASIC7.49□□□□□ -1.21
ERCC3P19447 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.49□□□□□ -1.21
ERCC3P19447 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms