Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 FABP7P1-201ENST00000424004 391 ntBASIC3.08□□□□□ -1.92
APOBP04114 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 RPS12P10-201ENST00000427031 377 ntBASIC3.08□□□□□ -1.92
APOBP04114 CEACAMP6-201ENST00000452007 574 ntBASIC3.08□□□□□ -1.92
APOBP04114 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APOBP04114 SCARNA13-201ENST00000516672 275 ntBASIC3.08□□□□□ -1.92
APOBP04114 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.08□□□□□ -1.92
APOBP04114 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.08□□□□□ -1.92
APOBP04114 AC009951.1-201ENST00000623674 2614 ntBASIC3.08□□□□□ -1.92
APOBP04114 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 FP325330.3-201ENST00000623760 9537 ntBASIC3.08□□□□□ -1.92
APOBP04114 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 SNORA70C-201ENST00000384538 135 ntBASIC3.08□□□□□ -1.92
APOBP04114 U3.32-201ENST00000408116 212 ntBASIC3.08□□□□□ -1.92
APOBP04114 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.08□□□□□ -1.92
APOBP04114 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.08□□□□□ -1.92
APOBP04114 OR1H1P-201ENST00000448731 937 ntBASIC3.08□□□□□ -1.92
APOBP04114 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 MIR3138-201ENST00000585238 82 ntBASIC3.08□□□□□ -1.92
APOBP04114 AP000843.1-201ENST00000624880 701 ntBASIC3.08□□□□□ -1.92
APOBP04114 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 AL442639.1-201ENST00000625030 1899 ntBASIC3.08□□□□□ -1.92
APOBP04114 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBP04114 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBP04114 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
APOBP04114 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
APOBP04114 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 SNORA66-201ENST00000384792 133 ntBASIC3.07□□□□□ -1.92
APOBP04114 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
APOBP04114 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
APOBP04114 AMZ2P2-201ENST00000406819 1057 ntBASIC3.07□□□□□ -1.92
APOBP04114 AL117339.2-201ENST00000430475 180 ntBASIC3.07□□□□□ -1.92
APOBP04114 snoU109.5-201ENST00000516231 132 ntBASIC3.07□□□□□ -1.92
APOBP04114 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.07□□□□□ -1.92
APOBP04114 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.07□□□□□ -1.92
APOBP04114 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 LINC02210-201ENST00000444561 288 ntBASIC3.07□□□□□ -1.92
APOBP04114 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
APOBP04114 AL121834.1-201ENST00000572284 509 ntBASIC3.07□□□□□ -1.92
APOBP04114 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
APOBP04114 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 RNU6-761P-201ENST00000384148 107 ntBASIC3.07□□□□□ -1.92
APOBP04114 AC093840.1-201ENST00000511599 336 ntBASIC3.07□□□□□ -1.92
APOBP04114 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
APOBP04114 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC3.07□□□□□ -1.92
APOBP04114 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.07□□□□□ -1.92
APOBP04114 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOBP04114 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 AL357515.1-201ENST00000402967 542 ntBASIC3.07□□□□□ -1.92
APOBP04114 AL139039.2-201ENST00000407436 479 ntBASIC3.07□□□□□ -1.92
APOBP04114 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.07□□□□□ -1.92
APOBP04114 RPS12P31-201ENST00000491419 398 ntBASIC3.07□□□□□ -1.92
APOBP04114 GAPDHP62-201ENST00000515313 990 ntBASIC3.07□□□□□ -1.92
APOBP04114 AC084783.1-201ENST00000565846 910 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms