Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 VN1R12P-201ENST00000403778 876 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 RN7SKP29-201ENST00000410957 272 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 RPS26P4-201ENST00000431743 355 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC073587.1-201ENST00000447093 876 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 ACA64.1-201ENST00000459171 127 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC023194.2-201ENST00000465398 406 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AP002884.1-201ENST00000479691 655 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 RN7SL741P-201ENST00000482473 289 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC020890.1-201ENST00000491837 504 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 RNA5SP249-201ENST00000516127 99 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AP000859.1-201ENST00000525536 307 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 OR8G3P-201ENST00000533406 921 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC233280.2-201ENST00000603917 1070 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC009027.1-201ENST00000604510 479 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AL713998.2-201ENST00000604538 1198 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AL136131.3-201ENST00000607600 188 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AL359091.2-201ENST00000609303 556 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AL354854.1-201ENST00000455940 1363 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC104966.1-201ENST00000467010 1464 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.96□□□□□ -1.77
HLA-DQA1P01909 CUL4AP1-201ENST00000514750 1863 ntBASIC3.96□□□□□ -1.77
HLA-DQA1P01909 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DQA1P01909 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 MAPK10-349ENST00000641767 3661 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC069154.1-201ENST00000432914 542 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC005077.1-201ENST00000449226 375 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 DNAJB5P1-201ENST00000454004 806 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 GEMIN2P1-201ENST00000454246 752 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 MTCYBP14-201ENST00000457471 715 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC093166.4-201ENST00000457867 318 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 SEPT14P1-201ENST00000458703 648 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 RPL7P41-201ENST00000485823 957 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 RN7SL170P-201ENST00000487098 295 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC109464.1-201ENST00000511091 819 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 RFPL4AP5-201ENST00000514977 504 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC022882.1-201ENST00000532142 501 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 RPA2P1-201ENST00000556557 721 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AGGF1P9-201ENST00000561884 913 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 MIR4701-201ENST00000583094 63 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 FAM27E4-201ENST00000605259 342 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC009779.8-202ENST00000607990 932 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AL353600.1-201ENST00000608148 251 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 OR7M1P-201ENST00000608946 533 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 AC073593.1-201ENST00000624500 411 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1P01909 NEPNP-201ENST00000404786 1371 ntBASIC3.96□□□□□ -1.78
HLA-DQA1P01909 MTCO1P22-201ENST00000604619 1360 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms