Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
LTBRP36941 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.43□□□□□ -1.38
LTBRP36941 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LTBRP36941 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.43□□□□□ -1.38
LTBRP36941 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 DDX18P6-201ENST00000450119 1997 ntBASIC6.42□□□□□ -1.38
LTBRP36941 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 RNA5SP46-201ENST00000362370 120 ntBASIC6.42□□□□□ -1.38
LTBRP36941 RNU6-553P-201ENST00000364047 96 ntBASIC6.42□□□□□ -1.38
LTBRP36941 RNA5SP500-201ENST00000364486 119 ntBASIC6.42□□□□□ -1.38
LTBRP36941 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 AL079342.2-201ENST00000403367 482 ntBASIC6.42□□□□□ -1.38
LTBRP36941 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 CBX1P3-201ENST00000413296 527 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AL096829.1-201ENST00000413677 457 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 BMS1P17-202ENST00000416720 316 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 HSPE1P16-201ENST00000426640 348 ntBASIC6.42□□□□□ -1.38
LTBRP36941 PRELID3BP10-201ENST00000431957 584 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 AL360221.1-201ENST00000445989 335 ntBASIC6.42□□□□□ -1.38
LTBRP36941 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 AC097262.1-201ENST00000452559 548 ntBASIC6.42□□□□□ -1.38
LTBRP36941 CDC42P1-201ENST00000456658 548 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AL133445.1-201ENST00000467051 452 ntBASIC6.42□□□□□ -1.38
LTBRP36941 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 AC079080.1-201ENST00000479841 822 ntBASIC6.42□□□□□ -1.38
LTBRP36941 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 AC138866.2-201ENST00000508650 584 ntBASIC6.42□□□□□ -1.38
LTBRP36941 RPL12P22-201ENST00000519073 490 ntBASIC6.42□□□□□ -1.38
LTBRP36941 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.42□□□□□ -1.38
LTBRP36941 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 DUXAP1-201ENST00000556632 463 ntBASIC6.42□□□□□ -1.38
LTBRP36941 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 AC007342.5-201ENST00000571340 2142 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 AC245297.2-201ENST00000610119 565 ntBASIC6.42□□□□□ -1.38
LTBRP36941 MIR6748-201ENST00000610433 71 ntBASIC6.42□□□□□ -1.38
LTBRP36941 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.42□□□□□ -1.38
LTBRP36941 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.42□□□□□ -1.38
LTBRP36941 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 AC119674.1-204ENST00000641348 1343 ntBASIC6.42□□□□□ -1.38
LTBRP36941 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.42□□□□□ -1.38
LTBRP36941 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.42□□□□□ -1.38
LTBRP36941 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LTBRP36941 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 CUBNP3-201ENST00000457461 1784 ntBASIC6.41□□□□□ -1.38
LTBRP36941 AL078595.2-201ENST00000605309 1780 ntBASIC6.41□□□□□ -1.38
LTBRP36941 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.41□□□□□ -1.38
LTBRP36941 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
LTBRP36941 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.41□□□□□ -1.38
LTBRP36941 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.41□□□□□ -1.38
LTBRP36941 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.41□□□□□ -1.38
LTBRP36941 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LTBRP36941 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LTBRP36941 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LTBRP36941 FAM3C2-201ENST00000312214 681 ntBASIC6.41□□□□□ -1.38
LTBRP36941 AL023284.3-201ENST00000407767 334 ntBASIC6.41□□□□□ -1.38
LTBRP36941 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms