Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 U4.1-201ENST00000620349 87 ntBASIC8.72□□□□□ -1.01
PTPREP23469 AC040168.1-201ENST00000623594 991 ntBASIC8.72□□□□□ -1.01
PTPREP23469 AC099667.1-201ENST00000624222 469 ntBASIC8.72□□□□□ -1.01
PTPREP23469 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTPREP23469 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTPREP23469 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.72□□□□□ -1.01
PTPREP23469 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTPREP23469 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTPREP23469 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PTPREP23469 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
PTPREP23469 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PTPREP23469 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.72□□□□□ -1.01
PTPREP23469 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
PTPREP23469 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTPREP23469 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTPREP23469 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.71□□□□□ -1.01
PTPREP23469 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.71□□□□□ -1.01
PTPREP23469 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
PTPREP23469 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.71□□□□□ -1.01
PTPREP23469 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTPREP23469 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PTPREP23469 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.71□□□□□ -1.01
PTPREP23469 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 AC011447.7-201ENST00000624228 1590 ntBASIC8.71□□□□□ -1.02
PTPREP23469 HMGB1P5-201ENST00000255320 642 ntBASIC8.71□□□□□ -1.02
PTPREP23469 SNORA73B-201ENST00000363217 204 ntBASIC8.71□□□□□ -1.02
PTPREP23469 RNU6-1322P-201ENST00000364309 107 ntBASIC8.71□□□□□ -1.02
PTPREP23469 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC8.71□□□□□ -1.02
PTPREP23469 CISD1P1-201ENST00000393907 327 ntBASIC8.71□□□□□ -1.02
PTPREP23469 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 RPSAP72-201ENST00000407020 358 ntBASIC8.71□□□□□ -1.02
PTPREP23469 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 RNU6-195P-201ENST00000411352 109 ntBASIC8.71□□□□□ -1.02
PTPREP23469 BCRP8-201ENST00000412037 255 ntBASIC8.71□□□□□ -1.02
PTPREP23469 NAP1L1P2-201ENST00000414182 1089 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.71□□□□□ -1.02
PTPREP23469 NENFP1-201ENST00000419476 466 ntBASIC8.71□□□□□ -1.02
PTPREP23469 CYP4F34P-201ENST00000425951 481 ntBASIC8.71□□□□□ -1.02
PTPREP23469 FO393419.3-201ENST00000428741 282 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC8.71□□□□□ -1.02
PTPREP23469 ANKRD54P1-201ENST00000433115 471 ntBASIC8.71□□□□□ -1.02
PTPREP23469 RPL35P8-201ENST00000433284 337 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.71□□□□□ -1.02
PTPREP23469 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.71□□□□□ -1.02
PTPREP23469 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 HMGN1P36-201ENST00000446623 298 ntBASIC8.71□□□□□ -1.02
PTPREP23469 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 U8.20-201ENST00000459445 131 ntBASIC8.71□□□□□ -1.02
PTPREP23469 RN7SL870P-201ENST00000460111 296 ntBASIC8.71□□□□□ -1.02
PTPREP23469 PSAT1P4-201ENST00000466500 526 ntBASIC8.71□□□□□ -1.02
PTPREP23469 RN7SL688P-201ENST00000471754 275 ntBASIC8.71□□□□□ -1.02
PTPREP23469 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.71□□□□□ -1.02
PTPREP23469 AP005902.1-201ENST00000521358 186 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AP004833.3-201ENST00000531893 322 ntBASIC8.71□□□□□ -1.02
PTPREP23469 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.71□□□□□ -1.02
PTPREP23469 RPS7P1-201ENST00000571702 585 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AC136618.2-201ENST00000575091 400 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.71□□□□□ -1.02
PTPREP23469 MIR4307-201ENST00000582802 84 ntBASIC8.71□□□□□ -1.02
PTPREP23469 OR7E19P-202ENST00000589942 844 ntBASIC8.71□□□□□ -1.02
PTPREP23469 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.71□□□□□ -1.02
PTPREP23469 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 AC005070.2-201ENST00000604391 260 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AL080274.1-201ENST00000605565 220 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AC113194.1-201ENST00000606037 500 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AL022238.3-201ENST00000609279 443 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AL161931.1-201ENST00000612768 246 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AL391903.2-201ENST00000614532 247 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AC025162.2-201ENST00000619602 560 ntBASIC8.71□□□□□ -1.02
PTPREP23469 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.71□□□□□ -1.02
PTPREP23469 AC073488.7-201ENST00000633785 778 ntBASIC8.71□□□□□ -1.02
PTPREP23469 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PTPREP23469 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PTPREP23469 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 AL035555.1-201ENST00000404462 1790 ntBASIC8.71□□□□□ -1.02
PTPREP23469 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PTPREP23469 AC010886.1-201ENST00000437380 2869 ntBASIC8.71□□□□□ -1.02
PTPREP23469 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.71□□□□□ -1.02
PTPREP23469 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
PTPREP23469 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PTPREP23469 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.7□□□□□ -1.02
PTPREP23469 MAPK10-333ENST00000641607 2481 ntBASIC8.7□□□□□ -1.02
PTPREP23469 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.7□□□□□ -1.02
PTPREP23469 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PTPREP23469 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PTPREP23469 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PTPREP23469 AL162578.1-201ENST00000406202 378 ntBASIC8.7□□□□□ -1.02
PTPREP23469 RNU6-373P-201ENST00000411247 98 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms