Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC027104.1-201ENST00000563702 681 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 MIR548S-201ENST00000581352 82 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC015688.2-201ENST00000584523 262 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC108747.1-201ENST00000609508 535 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC128687.2-201ENST00000609657 566 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC009237.15-201ENST00000610252 501 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC073569.3-201ENST00000619055 682 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC131009.3-201ENST00000621809 287 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AC015660.5-201ENST00000623238 564 ntBASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.51□□□□□ -1.05
CSB-PGBD3P0DP91 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CASC19-228ENST00000641414 1684 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 BX005019.1-201ENST00000561881 1810 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 MIR323A-201ENST00000362199 86 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 Y_RNA.88-201ENST00000363029 99 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 Y_RNA.517-201ENST00000384551 106 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AL034403.1-201ENST00000399414 885 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AL161449.1-201ENST00000414531 1199 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 MTCYBP1-201ENST00000454315 1119 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 RPL23AP44-201ENST00000482216 473 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC093890.1-201ENST00000502554 540 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC108120.2-201ENST00000512973 294 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 RNU6-232P-201ENST00000517144 64 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 DEFB130C-202ENST00000530001 230 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 OR4A6P-201ENST00000534364 970 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC007956.1-201ENST00000555623 542 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC005332.4-201ENST00000592752 579 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC010857.1-201ENST00000606398 594 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AL136984.1-201ENST00000607611 1893 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 OR1S1-201ENST00000624470 978 ntBASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CSB-PGBD3P0DP91 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC083806.2-201ENST00000617795 2685 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RARSP1-201ENST00000542842 1418 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RNA5SP477-201ENST00000362639 119 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RNU6-761P-201ENST00000384148 107 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RNA5SP105-201ENST00000391123 113 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RPL5P5-201ENST00000392009 893 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 RNA5SP178-201ENST00000410380 128 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AL513325.1-201ENST00000417716 1034 ntBASIC8.49□□□□□ -1.05
CSB-PGBD3P0DP91 AC246680.2-201ENST00000422106 389 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms