Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HMGB3P16-201ENST00000508037 287 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 RN7SKP99-201ENST00000517028 307 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC105031.1-201ENST00000518550 476 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 FO393422.1-201ENST00000603908 708 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC018695.5-201ENST00000605872 315 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC037198.3-201ENST00000616754 526 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 CU639417.4-201ENST00000623928 207 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AC005261.6-201ENST00000623072 1387 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 PCAT14-202ENST00000627127 3935 ntBASIC4.72□□□□□ -1.65
HLA-DPB1P04440 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DPB1P04440 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DPB1P04440 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.71□□□□□ -1.65
HLA-DPB1P04440 LINC01963-201ENST00000562038 3148 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 KARSP1-201ENST00000451871 1752 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC104260.2-201ENST00000623551 3497 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC005294.1-201ENST00000355509 281 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 RNU4-2-201ENST00000365668 141 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AL359643.1-201ENST00000404109 423 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 RNA5SP178-201ENST00000410380 128 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 MARK2P12-201ENST00000420129 585 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 OR5M12P-201ENST00000423388 929 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 OR2AH1P-201ENST00000425717 928 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AL390119.1-201ENST00000440329 312 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 RPL7P41-201ENST00000485823 957 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC090638.1-201ENST00000498296 909 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC022404.1-201ENST00000555320 273 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC012616.1-201ENST00000600294 197 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 RNA5SP440-201ENST00000612665 119 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC015914.2-201ENST00000618167 288 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC007683.2-201ENST00000624681 714 ntBASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPB1P04440 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 RNA5SP223-201ENST00000365174 120 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 MIR589-201ENST00000385238 99 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 TRAV35-201ENST00000390462 330 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 SNORA17A-201ENST00000391185 133 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 MIR1271-201ENST00000408537 86 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 CYCSP51-201ENST00000443545 318 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 RPL7P51-201ENST00000490532 749 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 MTND6P2-201ENST00000512226 524 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AC138938.1-201ENST00000515431 782 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 NRBF2P4-201ENST00000520874 850 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 SNORD95-201ENST00000579879 68 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AL118522.2-201ENST00000616045 615 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AC132068.1-201ENST00000623805 459 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 AL691477.1-201ENST00000624398 162 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 SNORA17.5-201ENST00000630429 132 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms