Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 AL353662.1-201ENST00000439099 327 ntBASIC7.09□□□□□ -1.27
SOX1O00570 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.09□□□□□ -1.27
SOX1O00570 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 AC003071.1-201ENST00000451219 789 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC026336.1-201ENST00000466577 351 ntBASIC7.09□□□□□ -1.27
SOX1O00570 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 RN7SL187P-201ENST00000495587 303 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC090071.1-201ENST00000507713 644 ntBASIC7.09□□□□□ -1.27
SOX1O00570 HMGB3P13-201ENST00000511263 607 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC114781.4-201ENST00000513707 639 ntBASIC7.09□□□□□ -1.27
SOX1O00570 RN7SKP244-201ENST00000516513 307 ntBASIC7.09□□□□□ -1.27
SOX1O00570 CDH12P4-201ENST00000517835 295 ntBASIC7.09□□□□□ -1.27
SOX1O00570 CDH12P3-201ENST00000517935 295 ntBASIC7.09□□□□□ -1.27
SOX1O00570 CDH12P1-201ENST00000518435 295 ntBASIC7.09□□□□□ -1.27
SOX1O00570 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.09□□□□□ -1.27
SOX1O00570 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.09□□□□□ -1.27
SOX1O00570 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 OR10G5P-201ENST00000532733 358 ntBASIC7.09□□□□□ -1.27
SOX1O00570 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.09□□□□□ -1.27
SOX1O00570 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.09□□□□□ -1.27
SOX1O00570 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC7.09□□□□□ -1.27
SOX1O00570 AP001267.4-201ENST00000602598 545 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC099676.1-201ENST00000608886 657 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC092681.3-201ENST00000609463 678 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC099654.5-201ENST00000636479 350 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AC012213.2-201ENST00000562917 4597 ntBASIC7.09□□□□□ -1.27
SOX1O00570 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 AC124045.1-201ENST00000606008 1953 ntBASIC7.09□□□□□ -1.27
SOX1O00570 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 MAPK10-347ENST00000641762 2856 ntBASIC7.09□□□□□ -1.27
SOX1O00570 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.09□□□□□ -1.28
SOX1O00570 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SOX1O00570 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
SOX1O00570 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.09□□□□□ -1.28
SOX1O00570 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 AC241584.2-201ENST00000637142 2090 ntBASIC7.08□□□□□ -1.28
SOX1O00570 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX1O00570 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SOX1O00570 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX1O00570 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SOX1O00570 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SOX1O00570 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SOX1O00570 OR11H13P-201ENST00000359695 979 ntBASIC7.08□□□□□ -1.28
SOX1O00570 RNA5SP172-201ENST00000365061 118 ntBASIC7.08□□□□□ -1.28
SOX1O00570 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
SOX1O00570 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SOX1O00570 RNU4-34P-201ENST00000410431 124 ntBASIC7.08□□□□□ -1.28
SOX1O00570 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.08□□□□□ -1.28
SOX1O00570 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.08□□□□□ -1.28
SOX1O00570 AC093155.1-201ENST00000440164 826 ntBASIC7.08□□□□□ -1.28
SOX1O00570 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.08□□□□□ -1.28
SOX1O00570 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SOX1O00570 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SOX1O00570 CFL1P4-201ENST00000451536 498 ntBASIC7.08□□□□□ -1.28
SOX1O00570 RNA5SP269-201ENST00000459032 137 ntBASIC7.08□□□□□ -1.28
SOX1O00570 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
SOX1O00570 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.08□□□□□ -1.28
SOX1O00570 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SOX1O00570 AC027801.3-201ENST00000515049 698 ntBASIC7.08□□□□□ -1.28
SOX1O00570 RNU6-718P-201ENST00000516166 105 ntBASIC7.08□□□□□ -1.28
SOX1O00570 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SOX1O00570 AP001646.1-201ENST00000527936 915 ntBASIC7.08□□□□□ -1.28
SOX1O00570 AP000662.1-201ENST00000530952 487 ntBASIC7.08□□□□□ -1.28
SOX1O00570 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX1O00570 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.08□□□□□ -1.28
SOX1O00570 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC7.08□□□□□ -1.28
SOX1O00570 OR6C7P-201ENST00000547875 934 ntBASIC7.08□□□□□ -1.28
SOX1O00570 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
SOX1O00570 AC009220.3-201ENST00000604318 586 ntBASIC7.08□□□□□ -1.28
SOX1O00570 AC069545.1-201ENST00000605671 358 ntBASIC7.08□□□□□ -1.28
SOX1O00570 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.08□□□□□ -1.28
SOX1O00570 AC090970.3-201ENST00000612566 866 ntBASIC7.08□□□□□ -1.28
SOX1O00570 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.08□□□□□ -1.28
SOX1O00570 AC063943.3-201ENST00000615562 356 ntBASIC7.08□□□□□ -1.28
SOX1O00570 AC138932.5-201ENST00000617759 563 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms