Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PCDHA3Q9Y5H8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA3Q9Y5H8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA3Q9Y5H8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA3Q9Y5H8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHA3Q9Y5H8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA3Q9Y5H8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
PCDHA3Q9Y5H8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 AC026185.1-201ENST00000445748 174 ntBASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA3Q9Y5H8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA3Q9Y5H8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 AL390719.1-204ENST00000412397 1219 ntBASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA3Q9Y5H8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 MIR663A-201ENST00000385250 93 ntBASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 MIPEPP3-201ENST00000412105 444 ntBASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 CROCCP5-201ENST00000436658 830 ntBASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms