Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 AIRN-201ENST00000601203 4374 ntBASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 RPS2P55-201ENST00000397318 883 ntBASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 AC107956.1-201ENST00000494359 873 ntBASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 LINC01006-201ENST00000333319 2292 ntBASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 PTBP1P-201ENST00000554374 1601 ntBASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA4Q9Y5G9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 TSPY7P-201ENST00000431358 1114 ntBASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA4Q9Y5G9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDHGA4Q9Y5G9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDHGA4Q9Y5G9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGA4Q9Y5G9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 KRT17P2-201ENST00000300992 1314 ntBASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA4Q9Y5G9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 SMG8-203ENST00000578922 2178 ntBASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA4Q9Y5G9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms