Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB11Q9Y5F2 TCF3P1-201ENST00000423021 1937 ntBASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB11Q9Y5F2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB11Q9Y5F2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB11Q9Y5F2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 PHGDH-210ENST00000641115 1638 ntBASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 AL121829.2-201ENST00000620908 328 ntBASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 AC113410.3-201ENST00000623366 203 ntBASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHB11Q9Y5F2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms