Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 AL032819.2-201ENST00000624543 2162 ntBASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 RPS2P52-201ENST00000469610 820 ntBASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 PTBP1P-201ENST00000554374 1601 ntBASIC15.65■□□□□ 0.1
LSM4Q9Y4Z0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.64■□□□□ 0.1
LSM4Q9Y4Z0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 ESRRAP1-201ENST00000400596 1257 ntBASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 DUSP5P2-201ENST00000426873 1033 ntBASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 AC098590.1-201ENST00000468126 897 ntBASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LSM4Q9Y4Z0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 AC010980.2-201ENST00000587099 1412 ntBASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 AC091874.3-201ENST00000512672 1195 ntBASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 AL591742.1-201ENST00000604433 565 ntBASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 AP006294.2-201ENST00000641667 209 ntBASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
LSM4Q9Y4Z0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms