Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SATB2Q9UPW6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 UNC93B2-201ENST00000285383 730 ntBASIC19.14■□□□□ 0.65
SATB2Q9UPW6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 AP000525.1-201ENST00000608286 694 ntBASIC19.14■□□□□ 0.65
SATB2Q9UPW6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 KRT8P9-201ENST00000558927 1449 ntBASIC19.14■□□□□ 0.65
SATB2Q9UPW6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SATB2Q9UPW6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 AP002982.1-201ENST00000492365 877 ntBASIC19.13■□□□□ 0.65
SATB2Q9UPW6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.13■□□□□ 0.65
SATB2Q9UPW6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 AL590326.2-201ENST00000625139 305 ntBASIC19.13■□□□□ 0.65
SATB2Q9UPW6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 AC079598.2-202ENST00000546624 1451 ntBASIC19.13■□□□□ 0.65
SATB2Q9UPW6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.13■□□□□ 0.65
SATB2Q9UPW6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 AC007225.1-201ENST00000566331 1836 ntBASIC19.12■□□□□ 0.65
SATB2Q9UPW6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 AC005521.1-201ENST00000393351 872 ntBASIC19.12■□□□□ 0.65
SATB2Q9UPW6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 MIR1238-201ENST00000408483 83 ntBASIC19.12■□□□□ 0.65
SATB2Q9UPW6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SATB2Q9UPW6 FEM1AP1-201ENST00000431297 1995 ntBASIC19.12■□□□□ 0.65
SATB2Q9UPW6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 AL031963.3-201ENST00000606441 850 ntBASIC19.11■□□□□ 0.65
SATB2Q9UPW6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SATB2Q9UPW6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SATB2Q9UPW6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms