Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 AL139125.2-201ENST00000623134 1869 ntBASIC8.11□□□□□ -1.11
MACF1Q9UPN3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 EMD-201ENST00000369835 966 ntTSL 3 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MACF1Q9UPN3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 AC116351.2-201ENST00000606540 1585 ntBASIC8.1□□□□□ -1.11
MACF1Q9UPN3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SNHG9-202ENST00000564014 471 ntBASIC8.1□□□□□ -1.11
MACF1Q9UPN3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 AC116407.3-201ENST00000623905 1129 ntBASIC8.1□□□□□ -1.11
MACF1Q9UPN3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 TK1-205ENST00000590862 642 ntTSL 3 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
MACF1Q9UPN3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 NFE2L3P1-201ENST00000588207 1959 ntBASIC8.09□□□□□ -1.11
MACF1Q9UPN3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 AL049840.3-201ENST00000602669 611 ntBASIC8.09□□□□□ -1.11
MACF1Q9UPN3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 AC005225.4-201ENST00000557330 545 ntBASIC8.09□□□□□ -1.11
MACF1Q9UPN3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC8.09□□□□□ -1.11
MACF1Q9UPN3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms