Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 AL355075.4-201ENST00000554988 638 ntBASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 HLA-A-209ENST00000638375 975 ntBASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 AL031985.4-201ENST00000642138 673 ntBASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBQLN1Q9UMX0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.03■□□□□ 0.96
UBQLN1Q9UMX0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 AC026271.3-201ENST00000571884 352 ntBASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBQLN1Q9UMX0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBQLN1Q9UMX0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBQLN1Q9UMX0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 AC004980.1-204ENST00000429707 299 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 TSPY15P-201ENST00000457163 923 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 AC116562.2-201ENST00000507042 360 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 BX088651.1-201ENST00000540551 451 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 REXO1L10P-201ENST00000615707 1290 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 REXO1L12P-201ENST00000622156 912 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 AC131212.4-201ENST00000623606 975 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 AC073912.3-201ENST00000624414 853 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 AC112907.3-201ENST00000577781 2400 ntBASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms