Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG3Q9UJ98 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
STAG3Q9UJ98 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG3Q9UJ98 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 FEM1AP4-201ENST00000443167 1987 ntBASIC28.22■■■□□ 2.11
STAG3Q9UJ98 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG3Q9UJ98 AC005332.1-201ENST00000577698 1310 ntBASIC28.21■■■□□ 2.11
STAG3Q9UJ98 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
STAG3Q9UJ98 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
STAG3Q9UJ98 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
STAG3Q9UJ98 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
STAG3Q9UJ98 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 TMEM179-206ENST00000616017 1645 ntBASIC28.19■■■□□ 2.1
STAG3Q9UJ98 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 VPS72-207ENST00000640458 689 ntTSL 5 BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
STAG3Q9UJ98 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 AC116407.4-201ENST00000623319 1061 ntBASIC28.18■■■□□ 2.1
STAG3Q9UJ98 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
STAG3Q9UJ98 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 BET1L-202ENST00000332865 533 ntTSL 5 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 DAP-202ENST00000432074 1048 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 CLEC4GP1-201ENST00000596555 870 ntBASIC28.17■■■□□ 2.1
STAG3Q9UJ98 AC069148.1-201ENST00000608741 768 ntBASIC28.17■■■□□ 2.1
STAG3Q9UJ98 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG3Q9UJ98 AC092720.2-201ENST00000602388 1665 ntBASIC28.16■■■□□ 2.1
STAG3Q9UJ98 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC28.16■■■□□ 2.1
STAG3Q9UJ98 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
STAG3Q9UJ98 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
STAG3Q9UJ98 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC28.16■■■□□ 2.1
STAG3Q9UJ98 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC28.16■■■□□ 2.1
STAG3Q9UJ98 PRSS44-201ENST00000515154 1146 ntBASIC28.16■■■□□ 2.1
STAG3Q9UJ98 NDUFV2-AS1-203ENST00000608008 779 ntBASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms