Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 YBX1P10-201ENST00000444752 975 ntBASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF1Q9UBU9 SLC25A24-204ENST00000569674 2357 ntBASIC21.05■□□□□ 0.96
NXF1Q9UBU9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 AC004264.1-201ENST00000608354 794 ntBASIC21.05■□□□□ 0.96
NXF1Q9UBU9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF1Q9UBU9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF1Q9UBU9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 UBE2SP1-201ENST00000450587 669 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms