Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 AP002982.1-201ENST00000492365 877 ntBASIC19.49■□□□□ 0.71
SPASTQ9UBP0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 AP003071.4-201ENST00000562276 1284 ntBASIC19.49■□□□□ 0.71
SPASTQ9UBP0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPASTQ9UBP0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 FAM197Y1-201ENST00000421178 764 ntBASIC19.48■□□□□ 0.71
SPASTQ9UBP0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 AC020907.5-201ENST00000624372 1936 ntBASIC19.48■□□□□ 0.71
SPASTQ9UBP0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPASTQ9UBP0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 AC087499.1-201ENST00000418141 1075 ntBASIC19.47■□□□□ 0.71
SPASTQ9UBP0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 TSPY15P-201ENST00000457163 923 ntBASIC19.47■□□□□ 0.71
SPASTQ9UBP0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 AL353708.3-201ENST00000610272 989 ntBASIC19.47■□□□□ 0.71
SPASTQ9UBP0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SPASTQ9UBP0 DPP3P2-201ENST00000416030 1696 ntBASIC19.46■□□□□ 0.71
SPASTQ9UBP0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 AC133561.5-201ENST00000635547 218 ntBASIC19.46■□□□□ 0.71
SPASTQ9UBP0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPASTQ9UBP0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPASTQ9UBP0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms