Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 AC069544.1-201ENST00000609399 999 ntBASIC18.02■□□□□ 0.48
UBQLN4Q9NRR5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN4Q9NRR5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN4Q9NRR5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.02■□□□□ 0.47
UBQLN4Q9NRR5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN4Q9NRR5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN4Q9NRR5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 MTDHP1-201ENST00000605323 784 ntBASIC18■□□□□ 0.47
UBQLN4Q9NRR5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN4Q9NRR5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 POU5F1P3-201ENST00000428824 1078 ntBASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 AC006058.3-201ENST00000606217 1069 ntBASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms