Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 AP003041.3-201ENST00000527151 707 ntBASIC18.33■□□□□ 0.52
CHD8Q9HCK8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
CHD8Q9HCK8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 KRT8P36-201ENST00000489121 1440 ntBASIC18.32■□□□□ 0.52
CHD8Q9HCK8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD8Q9HCK8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 HLA-G-202ENST00000376815 851 ntBASIC18.31■□□□□ 0.52
CHD8Q9HCK8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 AC239800.4-201ENST00000603712 296 ntBASIC18.31■□□□□ 0.52
CHD8Q9HCK8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.31■□□□□ 0.52
CHD8Q9HCK8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD8Q9HCK8 AC064862.7-201ENST00000604520 867 ntBASIC18.31■□□□□ 0.52
CHD8Q9HCK8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.31■□□□□ 0.52
CHD8Q9HCK8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 REXO1L6P-202ENST00000619970 1078 ntBASIC18.3■□□□□ 0.52
CHD8Q9HCK8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHD8Q9HCK8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 AC243591.1-201ENST00000452967 1364 ntBASIC18.29■□□□□ 0.52
CHD8Q9HCK8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 AP002414.4-201ENST00000589764 1148 ntBASIC18.29■□□□□ 0.52
CHD8Q9HCK8 AL121772.3-201ENST00000610840 674 ntBASIC18.29■□□□□ 0.52
CHD8Q9HCK8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 AL353801.3-201ENST00000609898 542 ntBASIC18.29■□□□□ 0.52
CHD8Q9HCK8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD8Q9HCK8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHD8Q9HCK8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD8Q9HCK8 LINC00167-201ENST00000530583 1419 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms