Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 AP003041.3-201ENST00000527151 707 ntBASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
ZFYVE28Q9HCC9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
ZFYVE28Q9HCC9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 ATP5G2P1-201ENST00000433580 426 ntBASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ZFYVE28Q9HCC9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.44■■□□□ 1.18
ZFYVE28Q9HCC9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 AC083849.1-201ENST00000615227 514 ntBASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.43■■□□□ 1.18
ZFYVE28Q9HCC9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 KRT8P45-201ENST00000414328 1447 ntBASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 AL160286.2-201ENST00000567150 934 ntBASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 TMEM179-206ENST00000616017 1645 ntBASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZFYVE28Q9HCC9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 KRT8P8-201ENST00000434750 1448 ntBASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZFYVE28Q9HCC9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZFYVE28Q9HCC9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZFYVE28Q9HCC9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
ZFYVE28Q9HCC9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms