Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SP110Q9HB58 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.07■□□□□ 0.8
SP110Q9HB58 KRASP1-201ENST00000407852 552 ntBASIC20.07■□□□□ 0.8
SP110Q9HB58 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SP110Q9HB58 YBX1P10-201ENST00000444752 975 ntBASIC20.07■□□□□ 0.8
SP110Q9HB58 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.07■□□□□ 0.8
SP110Q9HB58 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SP110Q9HB58 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SP110Q9HB58 RN7SL471P-201ENST00000580476 299 ntBASIC20.07■□□□□ 0.8
SP110Q9HB58 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SP110Q9HB58 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.07■□□□□ 0.8
SP110Q9HB58 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SP110Q9HB58 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SP110Q9HB58 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.07■□□□□ 0.8
SP110Q9HB58 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.07■□□□□ 0.8
SP110Q9HB58 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SP110Q9HB58 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SP110Q9HB58 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SP110Q9HB58 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SP110Q9HB58 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 NBPF21P-201ENST00000425093 1451 ntBASIC20.06■□□□□ 0.8
SP110Q9HB58 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SP110Q9HB58 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SP110Q9HB58 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.06■□□□□ 0.8
SP110Q9HB58 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SP110Q9HB58 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.06■□□□□ 0.8
SP110Q9HB58 C1QBPP2-201ENST00000528754 825 ntBASIC20.06■□□□□ 0.8
SP110Q9HB58 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.06■□□□□ 0.8
SP110Q9HB58 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.06■□□□□ 0.8
SP110Q9HB58 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SP110Q9HB58 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.06■□□□□ 0.8
SP110Q9HB58 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SP110Q9HB58 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.05■□□□□ 0.8
SP110Q9HB58 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SP110Q9HB58 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.05■□□□□ 0.8
SP110Q9HB58 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
SP110Q9HB58 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.05■□□□□ 0.8
SP110Q9HB58 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.05■□□□□ 0.8
SP110Q9HB58 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.05■□□□□ 0.8
SP110Q9HB58 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.05■□□□□ 0.8
SP110Q9HB58 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SP110Q9HB58 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.05■□□□□ 0.8
SP110Q9HB58 SLC25A24-204ENST00000569674 2357 ntBASIC20.05■□□□□ 0.8
SP110Q9HB58 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.05■□□□□ 0.8
SP110Q9HB58 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SP110Q9HB58 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.05■□□□□ 0.8
SP110Q9HB58 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.04■□□□□ 0.8
SP110Q9HB58 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SP110Q9HB58 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.04■□□□□ 0.8
SP110Q9HB58 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SP110Q9HB58 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SP110Q9HB58 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.04■□□□□ 0.8
SP110Q9HB58 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SP110Q9HB58 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SP110Q9HB58 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.03■□□□□ 0.8
SP110Q9HB58 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SP110Q9HB58 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SP110Q9HB58 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SP110Q9HB58 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.03■□□□□ 0.8
SP110Q9HB58 PRORSD1P-201ENST00000295112 541 ntBASIC20.03■□□□□ 0.8
SP110Q9HB58 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.03■□□□□ 0.8
SP110Q9HB58 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.03■□□□□ 0.8
SP110Q9HB58 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SP110Q9HB58 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.03■□□□□ 0.8
SP110Q9HB58 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SP110Q9HB58 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.03■□□□□ 0.8
SP110Q9HB58 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms