Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AL032819.2-201ENST00000624543 2162 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 YBX1P10-201ENST00000444752 975 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AL121829.2-201ENST00000620908 328 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AP006587.1-201ENST00000534129 1502 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC018445.3-201ENST00000624177 1945 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 SOX15-203ENST00000570788 1093 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC008687.6-201ENST00000596318 630 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRF2Q9HAW0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.69■□□□□ 0.58
BRF2Q9HAW0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.69■□□□□ 0.58
BRF2Q9HAW0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms