Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRF2Q9HAW0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AL032819.2-201ENST00000624543 2162 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 YBX1P10-201ENST00000444752 975 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AL121829.2-201ENST00000620908 328 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AP006587.1-201ENST00000534129 1502 ntBASIC18.72■□□□□ 0.59
BRF2Q9HAW0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRF2Q9HAW0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC018445.3-201ENST00000624177 1945 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 SOX15-203ENST00000570788 1093 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 AC008687.6-201ENST00000596318 630 ntBASIC18.71■□□□□ 0.59
BRF2Q9HAW0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
BRF2Q9HAW0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRF2Q9HAW0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRF2Q9HAW0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.69■□□□□ 0.58
BRF2Q9HAW0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.69■□□□□ 0.58
BRF2Q9HAW0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms