Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 AC092720.2-201ENST00000602388 1665 ntBASIC20.24■□□□□ 0.83
BRD9Q9H8M2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.23■□□□□ 0.83
BRD9Q9H8M2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRD9Q9H8M2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 AK4P3-201ENST00000418260 669 ntBASIC20.22■□□□□ 0.83
BRD9Q9H8M2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 BX664615.1-201ENST00000443558 458 ntBASIC20.22■□□□□ 0.83
BRD9Q9H8M2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.22■□□□□ 0.83
BRD9Q9H8M2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 LINC01238-205ENST00000567549 1107 ntBASIC20.21■□□□□ 0.83
BRD9Q9H8M2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 AC130371.2-201ENST00000619443 611 ntBASIC20.21■□□□□ 0.83
BRD9Q9H8M2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRD9Q9H8M2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.83
BRD9Q9H8M2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 AP000692.2-201ENST00000608391 879 ntBASIC20.2■□□□□ 0.82
BRD9Q9H8M2 FAM87A-204ENST00000613235 858 ntBASIC20.2■□□□□ 0.82
BRD9Q9H8M2 AC011298.2-201ENST00000617989 482 ntBASIC20.2■□□□□ 0.82
BRD9Q9H8M2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BRD9Q9H8M2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms