Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.68■□□□□ 0.26
MED28Q9H204 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.68■□□□□ 0.26
MED28Q9H204 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.68■□□□□ 0.26
MED28Q9H204 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 AL117332.1-201ENST00000622628 974 ntBASIC16.68■□□□□ 0.26
MED28Q9H204 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.68■□□□□ 0.26
MED28Q9H204 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.68■□□□□ 0.26
MED28Q9H204 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MED28Q9H204 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.68■□□□□ 0.26
MED28Q9H204 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MED28Q9H204 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MED28Q9H204 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.67■□□□□ 0.26
MED28Q9H204 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 AC021242.3-201ENST00000607598 1377 ntBASIC16.67■□□□□ 0.26
MED28Q9H204 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
MED28Q9H204 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.67■□□□□ 0.26
MED28Q9H204 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
MED28Q9H204 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
MED28Q9H204 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.67■□□□□ 0.26
MED28Q9H204 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MED28Q9H204 AC009237.14-201ENST00000609975 1594 ntBASIC16.67■□□□□ 0.26
MED28Q9H204 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MED28Q9H204 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MED28Q9H204 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
MED28Q9H204 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.66■□□□□ 0.26
MED28Q9H204 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.66■□□□□ 0.26
MED28Q9H204 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 AL161938.1-201ENST00000569833 2180 ntBASIC16.66■□□□□ 0.26
MED28Q9H204 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 MIR4508-201ENST00000584178 70 ntBASIC16.66■□□□□ 0.26
MED28Q9H204 AC010980.1-201ENST00000587192 1142 ntBASIC16.66■□□□□ 0.26
MED28Q9H204 AC067852.2-201ENST00000590513 2313 ntBASIC16.66■□□□□ 0.26
MED28Q9H204 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.66■□□□□ 0.26
MED28Q9H204 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MED28Q9H204 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MED28Q9H204 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.65■□□□□ 0.26
MED28Q9H204 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MED28Q9H204 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.65■□□□□ 0.26
MED28Q9H204 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms