Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR2J3Q9H1A7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 AL162430.1-201ENST00000480705 870 ntBASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 AC005181.1-201ENST00000604782 1256 ntBASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 AL032819.2-201ENST00000624543 2162 ntBASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 AC020763.4-201ENST00000623414 4170 ntBASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR2J3Q9H1A7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 KRT17P1-201ENST00000399211 1546 ntBASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
POLR2J3Q9H1A7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 LSM12P1-201ENST00000411836 588 ntBASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR2J3Q9H1A7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 AC093787.1-201ENST00000450396 207 ntBASIC18.05■□□□□ 0.48
POLR2J3Q9H1A7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms