Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 KRT8P8-201ENST00000434750 1448 ntBASIC18.63■□□□□ 0.57
STRADBQ9C0K7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 TMEM179-206ENST00000616017 1645 ntBASIC18.63■□□□□ 0.57
STRADBQ9C0K7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.63■□□□□ 0.57
STRADBQ9C0K7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 AC063952.2-201ENST00000498792 1227 ntBASIC18.62■□□□□ 0.57
STRADBQ9C0K7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 AL512604.3-201ENST00000569583 964 ntBASIC18.62■□□□□ 0.57
STRADBQ9C0K7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
STRADBQ9C0K7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 CLDN5-201ENST00000403084 2357 ntBASIC18.61■□□□□ 0.57
STRADBQ9C0K7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 INGX-201ENST00000359239 846 ntBASIC18.61■□□□□ 0.57
STRADBQ9C0K7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 RNF152P1-201ENST00000397754 604 ntBASIC18.61■□□□□ 0.57
STRADBQ9C0K7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 AC091076.1-201ENST00000610741 619 ntBASIC18.61■□□□□ 0.57
STRADBQ9C0K7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
STRADBQ9C0K7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
STRADBQ9C0K7 AC092647.4-201ENST00000457211 535 ntBASIC18.6■□□□□ 0.57
STRADBQ9C0K7 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
STRADBQ9C0K7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STRADBQ9C0K7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 AC117947.1-201ENST00000427448 529 ntBASIC18.59■□□□□ 0.57
STRADBQ9C0K7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 AC091390.4-202ENST00000476426 537 ntBASIC18.59■□□□□ 0.57
STRADBQ9C0K7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STRADBQ9C0K7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms