Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 MIR1224-201ENST00000408193 85 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 NUDT16P1-203ENST00000513809 620 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 RN7SL850P-201ENST00000579959 291 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC073195.1-201ENST00000607241 877 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC012306.2-201ENST00000609350 630 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC010331.1-201ENST00000611423 582 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 KRT16P6-202ENST00000425692 1426 ntBASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 NIFKP9-201ENST00000419265 221 ntBASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 FAM210CP-201ENST00000445714 574 ntBASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 LINC01023-201ENST00000606054 436 ntBASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AC004264.1-201ENST00000608354 794 ntBASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AC010947.1-201ENST00000623454 693 ntBASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms