Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA4Q9BXL8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 Z98044.1-201ENST00000632503 1764 ntBASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA4Q9BXL8 AL354751.1-201ENST00000412768 1863 ntBASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 PHGDH-210ENST00000641115 1638 ntBASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 AC020916.1-201ENST00000587762 1774 ntBASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 AC027612.3-201ENST00000413684 1047 ntBASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA4Q9BXL8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 PCDHB18P-201ENST00000524813 2368 ntBASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 NOC2LP2-201ENST00000407594 1944 ntBASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 TEX21P-204ENST00000641479 1693 ntBASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 AC123595.1-201ENST00000440769 1046 ntBASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms